Software und Tools
rhizoTrak
rhizoTrak is a software tool for handy manual annotation of root images. It is particularly well-suited for the annotation of time-series images as for example acquired with minirhizotrons.
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PaCeQuant
A Tool for High-Throughput Quantification of Pavement Cell Shape Characteristics
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CytoskeletonAnalyzer2D
This tool allows to quantify similarities and differences in structural organization of the cytoskeleton within cells, e.g., with regard to actin or microtubuli structures.
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MiToBo Cell Counter
An ImageJ/Fiji plugin for semi-automatic labeling and counting of spot-like structures and small cells in images. The plugin is based on the popular ImageJ CellCounter plugin by Kurt De Vos and extends its functionality towards improved usability and integration of automatic segmentation algorithms.
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Alida
Advanced Library for Integrated Development of Data Analysis Applications
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