Packages
cmdTools.cellAnalysis  
cmdTools.mtb_imagetools  
cmdTools.tracking.multitarget  
cmdTools.visualization  
de.unihalle.informatik.MiToBo.apps.cells2D  
de.unihalle.informatik.MiToBo.apps.cytoplasm2D  
de.unihalle.informatik.MiToBo.apps.datatypes.cellImages  
de.unihalle.informatik.MiToBo.apps.neurites2D  
de.unihalle.informatik.MiToBo.apps.neurons2D  
de.unihalle.informatik.MiToBo.apps.nuclei2D  
de.unihalle.informatik.MiToBo.apps.particles2D  
de.unihalle.informatik.MiToBo.apps.scratchAssay  
de.unihalle.informatik.MiToBo.apps.singleCellTracking2D  
de.unihalle.informatik.MiToBo.core.batch.provider.input.swing  
de.unihalle.informatik.MiToBo.core.batch.provider.output.swing  
de.unihalle.informatik.MiToBo.core.dataio  
de.unihalle.informatik.MiToBo.core.dataio.provider.cmdline  
de.unihalle.informatik.MiToBo.core.dataio.provider.swing  
de.unihalle.informatik.MiToBo.core.dataio.provider.swing.components  
de.unihalle.informatik.MiToBo.core.datatypes Provides basic datatypes for MiToBo.
de.unihalle.informatik.MiToBo.core.datatypes.defines  
de.unihalle.informatik.MiToBo.core.datatypes.images Contains MiToBo image data types.
de.unihalle.informatik.MiToBo.core.datatypes.neurites  
de.unihalle.informatik.MiToBo.core.datatypes.wrapper Provides wrapper for for input and output datatypes for MiToBo operators.
de.unihalle.informatik.MiToBo.core.exceptions Defines MiToBo exceptions.
de.unihalle.informatik.MiToBo.core.grappa  
de.unihalle.informatik.MiToBo.core.gui  
de.unihalle.informatik.MiToBo.core.helpers  
de.unihalle.informatik.MiToBo.core.imageJ Provides convenience classes for interaction with ImageJ system.
de.unihalle.informatik.MiToBo.core.operator Provides basis classes for MiToBo operator concept.
de.unihalle.informatik.MiToBo.drawing Provides operators to visualize data types.
de.unihalle.informatik.MiToBo.enhance Provides classes for image preprocessing and improvement (no filters!).
de.unihalle.informatik.MiToBo.fields Provides classes for calculating gradient vector flow fields, image gradient fields, potential fields and other possible fields from different data sources.
de.unihalle.informatik.MiToBo.filters.linear Provides classes implementing linear systems.
de.unihalle.informatik.MiToBo.filters.nonlinear Provides classes implementing nonlinear image filters.
de.unihalle.informatik.MiToBo.gui  
de.unihalle.informatik.MiToBo.io.dirs Provides classes for dealing with directories.
de.unihalle.informatik.MiToBo.io.files Provides classes for handling (non-)image files.
de.unihalle.informatik.MiToBo.io.images Provides classes for handling image files.
de.unihalle.informatik.MiToBo.io.tools Contains helper classes for image I/O.
de.unihalle.informatik.MiToBo.math Provides arithmetic operations on images.
de.unihalle.informatik.MiToBo.math.distributions.impl  
de.unihalle.informatik.MiToBo.math.distributions.interfaces  
de.unihalle.informatik.MiToBo.math.optimization  
de.unihalle.informatik.MiToBo.morphology Provides classes for morphological processing of binary images.
de.unihalle.informatik.MiToBo.segmentation.activecontours.datatypes  
de.unihalle.informatik.MiToBo.segmentation.activecontours.energies  
de.unihalle.informatik.MiToBo.segmentation.activecontours.exceptions  
de.unihalle.informatik.MiToBo.segmentation.basics  
de.unihalle.informatik.MiToBo.segmentation.contours.extraction Provides classes for performing contour extractions from regions or other image elements.
de.unihalle.informatik.MiToBo.segmentation.evaluation  
de.unihalle.informatik.MiToBo.segmentation.levelset.core  
de.unihalle.informatik.MiToBo.segmentation.levelset.nonPDE  
de.unihalle.informatik.MiToBo.segmentation.regions.filling Provides operators for filling wholes in binary 2D/3D regions.
de.unihalle.informatik.MiToBo.segmentation.regions.labeling Provides classes to perform region labeling to find connected components in binarized images.
de.unihalle.informatik.MiToBo.segmentation.snakes.datatypes Provides basic datatypes for MiToBo explicit active contours (snakes).
de.unihalle.informatik.MiToBo.segmentation.snakes.energies Provides classes with energies to be used with MiToBo snakes.
de.unihalle.informatik.MiToBo.segmentation.snakes.energies.paramAdapt Provides classes with parameter adaptation for energies to be used with MiToBo snakes.
de.unihalle.informatik.MiToBo.segmentation.snakes.optimize Provides classes for performing snake-based segmentation on images.
de.unihalle.informatik.MiToBo.segmentation.snakes.optimize.stepsize Provides classes for calculating several update strategies of the snake step size gamma.
de.unihalle.informatik.MiToBo.segmentation.snakes.optimize.termination Provides classes for calculating several termination strategies of the snake optimization.
de.unihalle.informatik.MiToBo.segmentation.thresholds Provides classes for thresholding grayscale and color images.
de.unihalle.informatik.MiToBo.tools  
de.unihalle.informatik.MiToBo.tools.image  
de.unihalle.informatik.MiToBo.tools.system  
de.unihalle.informatik.MiToBo.tracking.multitarget.algo  
de.unihalle.informatik.MiToBo.tracking.multitarget.datatools  
de.unihalle.informatik.MiToBo.tracking.multitarget.datatypes.abstracts  
de.unihalle.informatik.MiToBo.tracking.multitarget.datatypes.impl  
de.unihalle.informatik.MiToBo.tracking.multitarget.datatypes.interfaces  
de.unihalle.informatik.MiToBo.tracking.multitarget.distributions.abstracts  
de.unihalle.informatik.MiToBo.tracking.multitarget.distributions.impl  
de.unihalle.informatik.MiToBo.tracking.multitarget.eval  
de.unihalle.informatik.MiToBo.transforms  
mtb_io Provides plugins for MiToBo image I/O.
mtb_segmentation Provides plugins for image segmentation in general.