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java.lang.Objectde.unihalle.informatik.Alida.operator.ALDOperator
de.unihalle.informatik.MiToBo.core.operator.MTBOperator
de.unihalle.informatik.MiToBo.apps.nuclei2D.NucleusSeparator2DAlgos
public abstract class NucleusSeparator2DAlgos
Common super class for all nucleus separators.
This class is mainly used for enabling Alida/MiToBo operators to handle different nucleus separator algorithms in a generic fashion.
Nested Class Summary |
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Nested classes/interfaces inherited from class de.unihalle.informatik.Alida.operator.ALDOperator |
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de.unihalle.informatik.Alida.operator.ALDOperator.HidingMode |
Field Summary | |
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protected MTBImage |
inputImg
Input image to be processed. |
protected MTBImage |
labelImg
Input image to process. |
protected MTBImageShort |
resultImg
Result label image of separated nuclei. |
Fields inherited from class de.unihalle.informatik.Alida.operator.ALDOperator |
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completeDAG, name, portHashAccess, verbose, versionProvider |
Constructor Summary | |
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NucleusSeparator2DAlgos()
Empty constructor. |
Method Summary | |
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MTBImageShort |
getResultImg()
Get value of resultImg. |
protected abstract void |
operate()
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void |
setInputGrayScaleImage(MTBImage img)
Specify input gray-scale image. |
void |
setInputLabelImage(MTBImage img)
Specify label input image. |
void |
setResultImg(MTBImageShort value)
Set value of resultImg. |
Methods inherited from class de.unihalle.informatik.MiToBo.core.operator.MTBOperator |
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readResolve |
Methods inherited from class de.unihalle.informatik.Alida.operator.ALDOperator |
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deserializeFromXmlFile, fieldContained, getALDPortHashAccessKey, getConstructionMode, getInInoutNames, getInInoutNames, getInNames, getInOutNames, getMissingRequiredInputs, getName, getNumParameters, getOutInoutNames, getOutNames, getParameter, getParameterDescriptor, getParameterNames, getSupplementalNames, getVerbose, getVersion, isConfigured, parametersToXmlObject, print, print, print, printInterface, printInterface, readHistory, reinitializeParameterDescriptors, runOp, runOp, runOp, serializeToXmlFile, setConstructionMode, setName, setParameter, setParametersFromXml, setParametersFromXml, setVerbose, toStringVerbose, unconfiguredItems, validate, validateCustom, validateGeneric, writeHistory, writeHistory, writeHistory, writeParametersToXml |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
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@Parameter(label="Greyscale Input Image", required=true, direction=IN, dataIOOrder=-101, mode=STANDARD, description="Greyscale input image to be analyzed.") protected transient MTBImage inputImg
@Parameter(label="Label input image", required=true, dataIOOrder=-100, direction=IN, description="Label input image of nuclei.") protected transient MTBImage labelImg
@Parameter(label="Result image", direction=OUT, description="Label image of separated nuclei.") protected transient MTBImageShort resultImg
Constructor Detail |
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public NucleusSeparator2DAlgos() throws de.unihalle.informatik.Alida.exceptions.ALDOperatorException
de.unihalle.informatik.Alida.exceptions.ALDOperatorException
Method Detail |
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public MTBImageShort getResultImg()
protected abstract void operate() throws de.unihalle.informatik.Alida.exceptions.ALDOperatorException, de.unihalle.informatik.Alida.exceptions.ALDProcessingDAGException
operate
in class de.unihalle.informatik.Alida.operator.ALDOperator
de.unihalle.informatik.Alida.exceptions.ALDOperatorException
de.unihalle.informatik.Alida.exceptions.ALDProcessingDAGException
public void setInputGrayScaleImage(MTBImage img)
public void setInputLabelImage(MTBImage img)
public void setResultImg(MTBImageShort value)
value
- New value of resultImg
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